Insertion junction: CLIP2.048661_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048661
Chromosome:chromosome 3
Location:6812420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197250 (1 of 1) PTHR13948//PTHR13948:SF25 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCAAACCGTACCTCACAGGCGGGCTCCTGCTGCGGCTGCTGCTGCTA
Internal bar code:GACTCGCGATATTACCAACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2640
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCTCACAGTAGCGCTT
Suggested primer 2:TGGTTCTGTCCTTTCCACCG