Insertion junction: CLIP2.048661_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048661
Chromosome:chromosome 3
Location:6812424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197250 (1 of 1) PTHR13948//PTHR13948:SF25 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGCAAGCCTGGGTTGTAATTTGTGTTCGCGTCTGCCGTGGCTTGCGT
Internal bar code:ATGCTATATGCTGACTACGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTCTGTCCTTTCCACCG
Suggested primer 2:CTCTGCTCACAGTAGCGCTT