Insertion junction: CLIP2.048674_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048674
Chromosome:chromosome 12
Location:7948548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552850 CGL77 (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAAGTGAATGGGTAGCCAGGTGCAGTGGCAGAGTAGACACAACACAC
Internal bar code:AGATGATATGAGGGAATTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:839
LEAP-Seq percent confirming:53.6585
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACGTGCTGAGTGGGCAT
Suggested primer 2:GCAGCGAGAGGATTAGGGAC