Insertion junction: CLIP2.048676_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048676
Chromosome:chromosome 15
Location:599600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636600 FAP391 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1); Flagellar Associated Leucine Rich Repeat Protein 391 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGGACTGCAGGTATACGCTTTGTGTTGGCTTGGTTACATGTGTGGCT
Internal bar code:AAGATGTCCGCTTTGTGAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGTTGCATTTCCACGCC
Suggested primer 2:ATGACAACAGCAACAACGGC