Insertion junction: CLIP2.048678_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048678
Chromosome:chromosome 13
Location:1125978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569450 (1 of 1) IPR000104//IPR029058 - Antifreeze protein, type I // Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTCATCTCCTGCTGGTGCTCCCGCCCAGTGCCCGCGCGTGCGAGCCT
Internal bar code:CGGTTCGGTGTCCTGTCTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1112
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGTAAGGTTGGGAAGAT
Suggested primer 2:CGCCTTTGCCCTTAACAACC