Insertion junction: CLIP2.048681_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048681
Chromosome:chromosome 2
Location:2805728
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g094350 (1 of 1) PTHR23316//PTHR23316:SF30 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED; Importin Alpha 1b 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGAGGGTCAGGCGTGAGTATGAGAGACTGCATGTGGCACGTCAGCGA
Internal bar code:TCGAAGTGCGGGACCTGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATGCCAAAGCTTCGCAA
Suggested primer 2:CTAGCGGCATCTTGGAGGAG