Insertion junction: CLIP2.048685_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048685
Chromosome:chromosome 7
Location:4591405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344200 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAACAGCTGCCCAGCCGGAGCTGTAGAAGCTGTGCTGCCGCTGATGC
Internal bar code:AATAAATGGGGTCTTAGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATCTCGTTCTTGGGCCT
Suggested primer 2:CCCGCTGGAATCTAATCCCC