Insertion junction: CLIP2.048687_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048687
Chromosome:chromosome 10
Location:1447331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428150 (1 of 1) PTHR10566:SF58 - PROTEIN D2023.6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCTGCAGCAAACACACCGCGGCATAAACACACAGTTGTTACGACGT
Internal bar code:AATATGCGGATTGTTGGAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2794
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAGACCAACGACTGCCT
Suggested primer 2:AGTTTCCCCTGTGCTCGATG