Insertion junction: CLIP2.048690_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048690
Chromosome:chromosome 7
Location:313296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314300 (1 of 1) PF07092 - Protein of unknown function (DUF1356) (DUF1356) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATTCGTCGCTTTGCTGCATCGCATACGGTACACTGTCTTTGCGCTATG
Internal bar code:TATGCTGAAGTGCGGGCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1839
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGACGTGTCAATGTGT
Suggested primer 2:CTTGAGAGCGTGTGGACACT