Insertion junction: CLIP2.048703_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048703
Chromosome:chromosome 1
Location:3544258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023050 UBX2 (1 of 2) IPR006567//IPR018997 - PUG domain // PUB domain; Ubiquitin-associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCCGGTCCCAGCCCCGGTCCCAGCCCCAGTCCAAAGTATCCAACCC
Internal bar code:ATTTGTAAGCGTCAGATGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2354
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCAAGCGGAAGTTCTAC
Suggested primer 2:AAGATCTGCAAGGAAGGGCC