Insertion junction: CLIP2.048703_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048703
Chromosome:chromosome 7
Location:6041835
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g800867 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAACCTGAGGAAGGCGCCGCTGGTCCGTGTCGTCACCGCTAGCCCTGG
Internal bar code:GAGTCTAAGTCATAGTCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1829
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGCAGTATCAGCCGG
Suggested primer 2:GCAAGACCTACAAGCCCCAT