Insertion junction: CLIP2.048705_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048705
Chromosome:chromosome 14
Location:2612555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625225 (1 of 1) IPR007577//IPR016024//IPR029044 - Glycosyltransferase, DXD sugar-binding motif // Armadillo-type fold // Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGGAAACGTTGTGAAGGCATGCGTGTGGTCGTTTGCGTGCAATCCA
Internal bar code:CACTTTCGCACGGTGTCTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTCCTCGTGCATGTCAA
Suggested primer 2:CATTGGATCAAGCGCCATGG