Insertion junction: CLIP2.048711_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048711
Chromosome:chromosome 3
Location:4817842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178100 MOT51 (1 of 1) PTHR10877//PTHR10877:SF116 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGTGCCGGCGGCGTGGCGGTGCACTAGGAGGCATGAGACAACAGC
Internal bar code:GGGTAGGCAATGTATGAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3565
LEAP-Seq percent confirming:87.6923
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATGGTGCTGATTGCTTG
Suggested primer 2:CAGGATGACGGAGATGTCGG