Insertion junction: CLIP2.048712_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048712
Chromosome:chromosome 17
Location:2129361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711850 HTR5,HTR19,HTR30 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAGTCCTGGGCAATCTCACGGACCAGGCGCTGGAACGGCAGCTTGC
Internal bar code:CACTCGCTGTCCACTAGTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3502
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGATGCCCTGGATGT
Suggested primer 2:AGCTGCTCAATTCCTCCCAC