Insertion junction: CLIP2.048715_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048715
Chromosome:chromosome 3
Location:1889578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGTGCCGCCGTGCGCGCTCCTGGGGCTCGAGGTGGTCGAACTGCAG
Internal bar code:GTGGAAGGTGCGGACCTGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3375
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCTTGTGGGACTGCGTG
Suggested primer 2:GCTCCAGATAGTAGGCAGCG