Insertion junction: CLIP2.048718_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048718
Chromosome:chromosome 17
Location:3037347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720000 CCT9 (1 of 1) IPR002423//IPR027409 - Chaperonin Cpn60/TCP-1 family // GroEL-like apical domain; T-complex protein 1, eta subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCATGCTCCGTTGAGATTCGCATCTAGAAGGAACCGAGTAAAATGT
Internal bar code:CTACTGCATTATTAACCATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCTCCTGCTCCTCCTC
Suggested primer 2:GTGCACTTCCAAACGAGCTG