Insertion junction: CLIP2.048726_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048726
Chromosome:chromosome 3
Location:7985353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACTCACCCGCAGAAGCTAAGGAGGAAGATGACAGAGGTGATATTGGT
Internal bar code:TCTGGGGCTAAGTATTCCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4662
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTTACTGGCAAGCGAT
Suggested primer 2:TAGGGGTCCATCTCAGTGGG