Insertion junction: CLIP2.048727_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.048727
Chromosome:chromosome 3
Location:7535901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205300 EXN7 (1 of 1) IPR000104//IPR002562//IPR012337 - Antifreeze protein, type I // 3'-5' exonuclease domain // Ribonuclease H-like domain; 3'-5' exonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTCCGTGGCGACGCTACTGGCCGGCGACCCCGCCTTTGCGCCGGAGC
Internal bar code:CCTATACAATCGGTGCGCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTTGCTGTTGTTGCTG
Suggested primer 2:CAGCATGAATGTCAGCGACG