Insertion junction: CLIP2.048728_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048728
Chromosome:chromosome 13
Location:4134135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591150 HTA38,HTA22 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCCACGCCGTGCTGCTGCCCAAGAAGACCAAGGGCGGCAAGGCCGAG
Internal bar code:CCCACGGTAAGTGACCATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1565
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAGGCCACCCATCTACT
Suggested primer 2:CTACGCTCCAACTCGGATCC