Insertion junction: CLIP2.048731_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048731
Chromosome:chromosome 3
Location:2723689
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCTGCTCTTCCTTACCCTCCGCCACCCAGCCCGGAGCCGCCGTCCCC
Internal bar code:GTCTGGTGATATTGATGTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GATAAGGAGGAGCTGGCGAC
Suggested primer 2:GTCGCCAGCTCCTCCTTATC