Insertion junction: CLIP2.048734_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048734
Chromosome:chromosome 7
Location:4070161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340550 (1 of 1) IPR001878//IPR006568 - Zinc finger, CCHC-type // PSP, proline-rich CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGACCGGGCCGTGCCGGTTTGCGAGTGTCTGCGACCCCCACGATGTG
Internal bar code:AGGATGACCAATTATTCGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:982
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCACACAGAAGCTCCGA
Suggested primer 2:GGAGTGATAACTCTCCGGCG