Insertion junction: CLIP2.048736_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048736
Chromosome:chromosome 3
Location:9205911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199199 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCACACTTGGACTTGGTGAGCGCGTGAGCCCCCCCATGGTACGACCG
Internal bar code:TTTCATTTAGGGATCAGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2201
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGTCATTGTTGGCTGG
Suggested primer 2:CAGCACAGTTGTCAACAGCC