Insertion junction: CLIP2.048737_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048737
Chromosome:chromosome 7
Location:4821887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346000 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTGCAATCGCAGAGCACGCGGCCACCGCAACCCACAGTACTACATAC
Internal bar code:ACAAGTAAAGAGGTAATGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTATGTCGTGCGGCTGTG
Suggested primer 2:AAGACATCTGCCAGGTGCTC