Insertion junction: CLIP2.048739_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048739
Chromosome:chromosome 6
Location:7815529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303251 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACCCCAAACCCCCGCTCACAGGACTGGGCGTGCAGTGAGCGCCAAGC
Internal bar code:ATTTTGAACAGTGGCTAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2159
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGAACGTTCGTCAAGGA
Suggested primer 2:GGGGTATAATCACTCGGGCG