Insertion junction: CLIP2.048740_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048740
Chromosome:chromosome 1
Location:6689493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047700 CYN40 Cyclophilin 40; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGGAATGGGAGCAGTGATGGTGTTATTTCCGTCCGTGCGCCCTCGCC
Internal bar code:TTGATCAGTCTTTTAAGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2748
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTAGCGGATCCAGACCT
Suggested primer 2:CTCCACACACCTGGGATGAC