Insertion junction: CLIP2.048740_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048740
Chromosome:chromosome 1
Location:6689500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047700 CYN40 Cyclophilin 40; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAATCTCCCACCTCTCCCTGCCTGCAGTGGGCCGTGTGGTGTTCGAG
Internal bar code:TTGATCAGTCTTTTAAGACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:99
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACACACCTGGGATGAC
Suggested primer 2:AACCTAGCGGATCCAGACCT