Insertion junction: CLIP2.048747_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048747
Chromosome:chromosome 17
Location:430440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698850 ISA2,STA8 (1 of 2) 3.2.1.68 - Isoamylase / Debranching enzyme; Isoamylase-type starch debranching enzyme 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCATGCGGCCGAGTACACGTACGTACCCAGGATGCCCAGGTATTTGC
Internal bar code:AGGGGGGTGTGCCACCTGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1390
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATGCGGGAGTGCGTATG
Suggested primer 2:CCCCCGTCTCACCTGTAGTA