Insertion junction: CLIP2.048748_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048748
Chromosome:chromosome 7
Location:3229772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334150 (1 of 1) PTHR23097//PTHR23097:SF124 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACTGGCGCAAACCGCGAGTGCCACGTATTATTAATTGCTATTCCCTA
Internal bar code:TGCCGCTAGAGCGCTGGTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2322
LEAP-Seq percent confirming:78.3784
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCGACCGTGGATGTATG
Suggested primer 2:CGGACTCGTACTCATCCACG