Insertion junction: CLIP2.048749_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.048749
Chromosome:chromosome 3
Location:382909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144747 (1 of 1) PTHR10641//PTHR10641:SF518 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 100-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGGCGAGGCAGGTGCCCGGCCGCACCGGCAAGCAGTGCCGCGAGAAG
Internal bar code:CGGTGAGTCGACGAAGTCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:212
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTTGGTGGGTGGGGTTT
Suggested primer 2:CACTGGCGATCCTAGCTGAG