Insertion junction: CLIP2.048752_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048752
Chromosome:chromosome 2
Location:7954612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145300 (1 of 1) K15544 - RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (SSU72) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCTTAGGAGAAGCGCGTGAGCACTAACATGAGCCACTGAAGCAGTG
Internal bar code:ATCGGTCCTTGTTTTGGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1926
LEAP-Seq percent confirming:64.9351
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACTACGGTTTCCACGG
Suggested primer 2:ACACACGTGTATGGCGGAAT