Insertion junction: CLIP2.048753_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048753
Chromosome:chromosome 12
Location:3308040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498850 CEP12 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGCCCGCGGCCAGGGCCAGCGCAAGCACAAGCAACTGAGGCGACGT
Internal bar code:ACTGTGAAGTACGATGATTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4808
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACATGACGACGTGCATC
Suggested primer 2:AGGGTTTGCCTTTTGGGTCA