Insertion junction: CLIP2.048755_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048755
Chromosome:chromosome 7
Location:2235016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327350 CDPK8 Calcium/calmodulin-dependent protein kinase; (1 of 1) K04515 - calcium/calmodulin-dependent protein kinase (CaM kinase) II (CAMK2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAAACCCGTGCTGCCAAGAGGGGAGTCGGCGGCAAGCCCTCCTGCTG
Internal bar code:TTAGAGGCGATGCTAGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2655
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCGTCAGCTGCGTGTT
Suggested primer 2:TGAAACGGTGGTACGCGTAA