Insertion junction: CLIP2.048759_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048759
Chromosome:chromosome 8
Location:1659887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365950 (1 of 3) PTHR22753:SF1 - TRANSMEMBRANE PROTEIN 68 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGGGTTGGGGGTGTTTTGGGCATCTCCATTCAGGGAAGAGAAAGAAC
Internal bar code:AGGCGATATAAGAGAAGGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTAAGTTTGGGCTGGTA
Suggested primer 2:TCGCAGGTGATGGTAGAGGA