Insertion junction: CLIP2.048759_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048759
Chromosome:chromosome 12
Location:1128623
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g491000 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACACGCGGCACGGCATGGGCCACGCCATGCGCGACCAGCACGTGACGC
Internal bar code:CGCGTTAGCTCGGACCCCTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:120
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTTGTGAGGCGCAATG
Suggested primer 2:TTTCGAGTGGTGGGTGGATG