Insertion junction: CLIP2.048761_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048761
Chromosome:chromosome 4
Location:2224188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00096549

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTATACAGGGAAGTCCCAGCAAAGTCCTCGAGGTTTGGACTGCATCG
Internal bar code:GGCGATTGAGATAGTAGAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCCGCTAACGATAATCT
Suggested primer 2:CGCATTCATACACAGCTGCC