Insertion junction: CLIP2.048763_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048763
Chromosome:chromosome 12
Location:5741948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801436 (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGCCACAACCTCGCCCAGCCGCCCCCGGGAAGTGCGTACGGGGGCT
Internal bar code:GTAGGGGATTGGCAATTGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1344
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCATCATCAACCCCTTGC
Suggested primer 2:TTGGGTTGGAGGTGCTTGTT