Insertion junction: CLIP2.048764_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048764
Chromosome:chromosome 12
Location:3095155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501050 ALDH25,ALD6 Aldehyde/histidinol dehydrogenase; (1 of 1) 1.1.1.1//1.2.1.10 - Alcohol dehydrogenase / Aldehyde reductase // Acetaldehyde dehydrogenase (acetylating) / Aldehyde dehydrogenase (acylating) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACCACCAGGTTCTGTGGGGGAGGGGGAGGAAGTCATGCGCCCATGG
Internal bar code:TCGGCTGGGCTACAACTAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:888
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGAAGGAGTGGGCTCAGC
Suggested primer 2:GGTAGGTGATGGGTGGTTGG