Insertion junction: CLIP2.048766_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048766
Chromosome:chromosome 12
Location:8308242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551050 (1 of 1) PTHR31802//PTHR31802:SF3 - FAMILY NOT NAMED // 32 KDA HEAT SHOCK PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAACAACAAACCAAAGCCCGCCCAGACGTGTGTGTGTGTGTGTATGTG
Internal bar code:CTGAGTGTTTTCTCTAACCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:965
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCCCGCAAGCTCTTGA
Suggested primer 2:AAAGTCGCAAACGCAACCTC