Insertion junction: CLIP2.048767_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048767
Chromosome:chromosome 6
Location:3284443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277300 (1 of 4) PTHR22849//PTHR22849:SF39 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGCCGCCGCCAGCTCAGCAAAGCCGCGCGCCGCCGCCAGCGCCGCCG
Internal bar code:AAGGCTGTACGTGTCGAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1295
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACCCGTCCTTGACAACC
Suggested primer 2:CCCTCCAAACCCTATACCGC