Insertion junction: CLIP2.048771_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.048771
Chromosome:chromosome 16
Location:1861573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655500 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAGCCCCGGCACACGATCTGGCGTGGCCGCGCATCAATCAGCGACCT
Internal bar code:CTACTATTTATAAGTGACCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1042
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACCGCAGTCTTCGCAAA
Suggested primer 2:GGAGTGCTGTGACGAACTCA