Insertion junction: CLIP2.048777_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.048777
Chromosome:chromosome 4
Location:3030747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225150 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCAGGGTAGGCTGCAGATATGGGTCTCACGGGAGCCGTTATCTCGAG
Internal bar code:CAGCTATTGCGGAGCAAACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1962
LEAP-Seq percent confirming:82.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCATAGAGATGTGCGC
Suggested primer 2:AGCAATCAGGTCGAACACGT