Insertion junction: CLIP2.048786_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.048786
Chromosome:chromosome 17
Location:3828600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727300 NFO2 (1 of 3) 1.3.1.42 - 12-oxophytodienoate reductase; NADH:flavin oxidoreductase/NADH oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATCACGTCCTTGGCAGGGTCCTTGGCGTACCACACCTTGGCATCAAAG
Internal bar code:TGAACTACTGCACAGCAAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1940
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGCGGTTGTGCTTAAGA
Suggested primer 2:AATGGTGCAAGCCTGTACGA