Insertion junction: CLIP2.048786_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048786
Chromosome:chromosome 17
Location:3828601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727300 NFO2 (1 of 3) 1.3.1.42 - 12-oxophytodienoate reductase; NADH:flavin oxidoreductase/NADH oxidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACGGACTGGCCGCGGGTGGACCCCGCCACGATCAAGGCCTAGGCCT
Internal bar code:TGAACTACTGCACAGCAAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3188
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGTGCAAGCCTGTACGA
Suggested primer 2:AGTCGCGGTTGTGCTTAAGA