Insertion junction: CLIP2.048788_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048788
Chromosome:chromosome 2
Location:3853644
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g101250 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACGCACGTGCAGGGAGGTGGACCTGACGGACTGTGTGGGC
Internal bar code:CCGCATAGAGTATCTTTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:377
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGGCATCCACATTCAC
Suggested primer 2:AGCCCCTCACATAAAGCACC