Insertion junction: CLIP2.048794_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048794
Chromosome:chromosome 1
Location:6202328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044200 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTCCTGGCGCAAACCTGTGCATCCAGCTAGCCGCATCATCTCCATT
Internal bar code:GACACGCCACTGGGCTAGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2817
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGTTGGGCGCCATAAGCA
Suggested primer 2:TATGCCGGCATATGTCGCTT