Insertion junction: CLIP2.048796_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.048796
Chromosome:chromosome 1
Location:5901991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042000 (1 of 1) PF00023//PF00612//PF13637//PF13857 - Ankyrin repeat (Ank) // IQ calmodulin-binding motif (IQ) // Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCACAGCATTGCACGAGTCCAACACGCCTGAGCCCGCTGACTCGTT
Internal bar code:TTGGAAGATCAGCGACCGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:437
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCGGCATGTGTGTCTGT
Suggested primer 2:AAACAACCCACCTCCTGCTC