Insertion junction: CLIP2.048797_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048797
Chromosome:chromosome 1
Location:4314608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g029350 C1d-87,FAP297 Flagellar central pair-associated protein 297; (1 of 1) IPR006885//IPR017986 - NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCAAGTGCATGAGGCGGCGCAGCTGCTGCTCAATCAAAAGCTTCACA
Internal bar code:AGGCACCATGTGACTCAAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2545
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCGCAGTGTGGTTTC
Suggested primer 2:TCAAGCACGTTGTACCTGGG