Insertion junction: CLIP2.048799_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.048799
Chromosome:chromosome 3
Location:6820171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197350 CDC5 (1 of 1) K12860 - pre-mRNA-splicing factor CDC5/CEF1 (CDC5L, CDC5, CEF1); Cell Division Cycle 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACAGGTGGCTTACCTTCGCAGCGCCTGGGACCATGCCAAGCTGAGCC
Internal bar code:ATTTACGAGCTAATTGGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:909
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCCACAACAGCCTTCC
Suggested primer 2:TTGGAGCAGGCAGGAAGATG