Insertion junction: CLIP2.048802_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048802
Chromosome:chromosome 3
Location:2894556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162601 PGP3 (1 of 2) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase; Phosphatidylglycerophosphate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGAAATTGGCGCTGGCGGCCCTGGGGCAAGGCACCCCTCGACTTGC
Internal bar code:TTTATACCTCTAATCTAGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:43.3962
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCCCCGTAATACCTCT
Suggested primer 2:CACATCCTGGCCATGAACCT