| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | - |
| Strain: | CLIP2.048805 |
| Chromosome: | chromosome 12 |
| Location: | 23940 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre12.g483500 | (1 of 1) PF06101//PF12624//PF16908//PF16910 - Plant protein of unknown function (DUF946) (DUF946) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) | CDS |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TCAACCGCTCCATCCGCTCCGTGCTGGAGGCGCTGCAGGACACCTGCACA |
| Internal bar code: | GATAGTTGTAGGGTAAGCACAA |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 5067 |
| LEAP-Seq percent confirming: | 90.0 |
| LEAP-Seq n confirming: | 36 |
| LEAP-Seq n nonconfirming: | 4 |
| LEAP-Seq n unique pos: | 40 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | CATAGTAGCCCAGCCACAGG |
| Suggested primer 2: | ATCATTCGTGACGTGGGTCC |